STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT36510.1Aminotransferase. (381 aa)    
Predicted Functional Partners:
AKT43161.1
(2Fe-2S)-binding protein.
 
      0.673
maeB
Malic enzyme.
  
 
 0.527
AKT43632.1
Glutamate synthase.
  
  
 0.514
AKT36066.1
Homocysteine S-methyltransferase.
  
  
 0.466
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
  
  
 0.445
gltA
Type II citrate synthase; Belongs to the citrate synthase family.
  
 
 0.435
AKT42248.1
Citrate synthase; Belongs to the citrate synthase family.
  
 
 0.435
AKT36511.1
Uncharacterized protein.
       0.419
AKT42249.1
Citrate synthase.
  
 
 0.418
cobA
uroporphyrin-III C-methyltransferase; Belongs to the precorrin methyltransferase family.
  
  
 0.409
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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