Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKT36649.1Sensor histidine kinase. (677 aa)    
Predicted Functional Partners:
AKT37460.1
Diguanylate cyclase.
  
 
 0.941
AKT43360.1
Histidine kinase.
 
 
 0.911
AKT36799.1
Histidine kinase.
  
 
 0.888
AKT42322.1
Uncharacterized protein.
 
 
 0.836
AKT43143.1
Uncharacterized protein.
 
 
 0.831
AKT36412.1
Transcriptional regulator.
 
 
 0.823
AKT36476.1
Uncharacterized protein.
 
 
 0.821
AKT41879.1
Phosphohydrolase.
 
 
 0.819
AKT43954.1
Transcriptional regulator.
 
 
 0.798
AKT43916.1
Two-component hybrid sensor and regulator.
 
 
0.791
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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