STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT36673.1Uncharacterized protein. (170 aa)    
Predicted Functional Partners:
katE
Hydroperoxidase II; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
  
 0.684
AKT35945.1
Uncharacterized protein.
 
    0.645
AKT37640.1
Amino acid ABC transporter permease.
  
    0.630
bfr
Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.
   
  
 0.593
AKT40968.1
Transglycosylase.
 
    0.508
AKT36674.1
Uncharacterized protein.
  
    0.507
AKT39673.1
Uncharacterized protein.
 
  
 0.483
AKT40108.1
Transglycosylase.
 
    0.483
AKT38098.1
Uncharacterized protein.
  
  
 0.428
AKT40418.1
Uncharacterized protein.
  
    0.428
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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