STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aceAIsocitrate lyase. (441 aa)    
Predicted Functional Partners:
aceB
Malate synthase; Belongs to the malate synthase family.
 
 0.999
acnA
Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
   
 
 0.934
glcE-3
FAD-binding protein.
     
 0.906
AKT40949.1
3-isopropylmalate dehydratase large subunit.
     
 0.900
maeB
Malic enzyme.
   
  
 0.844
AKT38504.1
Uncharacterized protein; Belongs to the HpcH/HpaI aldolase family.
  
  
 0.822
AKT36682.1
Cro/Cl family transcriptional regulator.
 
   
 0.820
AKT43632.1
Glutamate synthase.
  
  
 0.493
paaG
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
  
 0.484
AKT43971.1
3-hydroxyacyl-CoA dehydrogenase.
  
  
 0.484
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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