Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKT36696.1Uncharacterized protein. (322 aa)    
Predicted Functional Partners:
AKT39974.1
ATP/GTP-binding protein.
 
     0.691
AKT43314.1
Uncharacterized protein.
  
  0.592
AKT39997.1
WD repeat-containing protein.
  
 
  0.575
AKT36748.1
Internalin.
  
     0.569
AKT44165.1
Uncharacterized protein.
  
     0.563
AKT40856.1
Uncharacterized protein.
  
     0.550
AKT39679.1
Uncharacterized protein.
  
 
   0.546
AKT40492.1
Uncharacterized protein.
  
 
  0.546
AKT37988.1
Uncharacterized protein.
  
  0.498
AKT37081.1
Uncharacterized protein.
  
     0.493
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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