STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gspCGeneral secretion pathway protein GspC. (320 aa)    
Predicted Functional Partners:
AKT36718.1
Uncharacterized protein.
 
 
 0.996
AKT36711.1
Uncharacterized protein.
 
  
 0.884
gspG
General secretion pathway protein GspG.
 
  
 0.835
gspL
General secretion pathway protein GspL.
 
   
 0.826
AKT36931.1
Uncharacterized protein.
 
     0.775
AKT36573.1
Uncharacterized protein.
  
    0.769
AKT41634.1
Uncharacterized protein.
  
     0.766
AKT42534.1
Uncharacterized protein.
 
     0.765
AKT39666.1
Phosphopeptide-binding protein.
  
     0.754
AKT35903.1
Uncharacterized protein.
  
     0.745
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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