STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT36788.1Neutral zinc metallopeptidase; Belongs to the peptidase M50B family. (383 aa)    
Predicted Functional Partners:
rfbB
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.661
AKT36787.1
Uncharacterized protein.
       0.648
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
  
 0.589
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
  
 
 0.504
AKT36786.1
Uncharacterized protein.
       0.502
degT
Aminotransferase DegT; Belongs to the DegT/DnrJ/EryC1 family.
   
  
 0.502
degT-2
Aminotransferase DegT; Belongs to the DegT/DnrJ/EryC1 family.
   
  
 0.502
degT-3
Aminotransferase DegT; Belongs to the DegT/DnrJ/EryC1 family.
   
  
 0.502
degT-4
Aminotransferase DegT; Belongs to the DegT/DnrJ/EryC1 family.
   
  
 0.502
AKT41213.1
Phosphoribosyltransferase.
 
  
 0.485
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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