STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cydACytochrome D ubiquinol oxidase subunit I. (441 aa)    
Predicted Functional Partners:
cydB
Cytochrome D ubiquinol oxidase subunit II.
 
 0.999
sdhB
Succinate dehydrogenase iron-sulfur subunit.
  
  
 0.680
AKT36847.1
Uncharacterized protein.
       0.668
sdhA
Succinate dehydrogenase.
  
  
 0.657
AKT36289.1
Succinate dehydrogenase flavoprotein subunit.
  
  
 0.652
sdhA-2
Succinate dehydrogenase.
     
 0.594
sdhA-3
Succinate dehydrogenase.
     
 0.594
AKT36850.1
Uncharacterized protein.
       0.499
AKT36846.1
Uncharacterized protein.
       0.491
hmp
Dihydropteridine reductase; Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress; Belongs to the globin family. Two-domain flavohemoproteins subfamily.
   
  
 0.481
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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