STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cydBCytochrome D ubiquinol oxidase subunit II. (337 aa)    
Predicted Functional Partners:
cydA
Cytochrome D ubiquinol oxidase subunit I.
 
 0.999
AKT36847.1
Uncharacterized protein.
       0.668
sdhA
Succinate dehydrogenase.
     
 0.599
sdhB
Succinate dehydrogenase iron-sulfur subunit.
     
 0.594
AKT36289.1
Succinate dehydrogenase flavoprotein subunit.
     
 0.594
sdhA-2
Succinate dehydrogenase.
     
 0.594
sdhA-3
Succinate dehydrogenase.
     
 0.594
AKT36850.1
Uncharacterized protein.
       0.499
AKT36846.1
Uncharacterized protein.
       0.491
AKT38001.1
4Fe-4S ferredoxin.
     
 0.438
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
Server load: low (32%) [HD]