Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKT36906.1Uncharacterized protein. (263 aa)    
Predicted Functional Partners:
AKT36907.1
Uncharacterized protein.
     
 0.790
AKT36905.1
Histidine kinase.
     
 0.787
AKT36904.1
Histidine kinase.
     
 0.775
AKT36908.1
Cobalamin-binding protein.
       0.773
AKT42555.1
Uncharacterized protein.
  
     0.709
AKT42554.1
Uncharacterized protein.
  
     0.648
AKT37312.1
Uncharacterized protein.
  
     0.629
AKT41803.1
Uncharacterized protein.
  
     0.624
AKT42640.1
Uncharacterized protein.
  
     0.599
AKT42993.1
MBL fold metallo-hydrolase.
  
     0.599
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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