AKT36948.1 protein (Chondromyces crocatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

AKT36948.1

Uncharacterized protein. (321 aa)

Predicted Functional Partners:

AKT36949.1

0.773

smtA-6

0.723

AKT44118.1

0.671

AKT36947.1

0.634

AKT40330.1

0.534

AKT36946.1

0.518

AKT43987.1

0.495

ubiE

0.478

AKT38569.1

0.463

AKT36944.1

0.456

Your Current Organism:

Chondromyces crocatus

NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AKT36944.1	AKT36946.1	CMC5_010650	CMC5_010670	Uncharacterized protein.	Uncharacterized protein.	0.773
AKT36944.1	AKT36947.1	CMC5_010650	CMC5_010680	Uncharacterized protein.	Uncharacterized protein.	0.546
AKT36944.1	AKT36948.1	CMC5_010650	CMC5_010690	Uncharacterized protein.	Uncharacterized protein.	0.456
AKT36944.1	AKT36949.1	CMC5_010650	CMC5_010700	Uncharacterized protein.	Uncharacterized protein.	0.456
AKT36946.1	AKT36944.1	CMC5_010670	CMC5_010650	Uncharacterized protein.	Uncharacterized protein.	0.773
AKT36946.1	AKT36947.1	CMC5_010670	CMC5_010680	Uncharacterized protein.	Uncharacterized protein.	0.552
AKT36946.1	AKT36948.1	CMC5_010670	CMC5_010690	Uncharacterized protein.	Uncharacterized protein.	0.518
AKT36946.1	AKT36949.1	CMC5_010670	CMC5_010700	Uncharacterized protein.	Uncharacterized protein.	0.456
AKT36947.1	AKT36944.1	CMC5_010680	CMC5_010650	Uncharacterized protein.	Uncharacterized protein.	0.546
AKT36947.1	AKT36946.1	CMC5_010680	CMC5_010670	Uncharacterized protein.	Uncharacterized protein.	0.552
AKT36947.1	AKT36948.1	CMC5_010680	CMC5_010690	Uncharacterized protein.	Uncharacterized protein.	0.634
AKT36947.1	AKT36949.1	CMC5_010680	CMC5_010700	Uncharacterized protein.	Uncharacterized protein.	0.634
AKT36948.1	AKT36944.1	CMC5_010690	CMC5_010650	Uncharacterized protein.	Uncharacterized protein.	0.456
AKT36948.1	AKT36946.1	CMC5_010690	CMC5_010670	Uncharacterized protein.	Uncharacterized protein.	0.518
AKT36948.1	AKT36947.1	CMC5_010690	CMC5_010680	Uncharacterized protein.	Uncharacterized protein.	0.634
AKT36948.1	AKT36949.1	CMC5_010690	CMC5_010700	Uncharacterized protein.	Uncharacterized protein.	0.773
AKT36948.1	AKT38569.1	CMC5_010690	CMC5_027160	Uncharacterized protein.	Uncharacterized protein.	0.463
AKT36948.1	AKT40330.1	CMC5_010690	CMC5_044830	Uncharacterized protein.	Uncharacterized protein.	0.534
AKT36948.1	AKT43987.1	CMC5_010690	CMC5_082250	Uncharacterized protein.	Uncharacterized protein.	0.495
AKT36948.1	AKT44118.1	CMC5_010690	CMC5_083580	Uncharacterized protein.	Uncharacterized protein.	0.671