STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT37014.1Murein endopeptidase. (322 aa)    
Predicted Functional Partners:
AKT37015.1
DNA methyltransferase; Belongs to the N(4)/N(6)-methyltransferase family.
       0.780
plsB
Glycerol-3-phosphate acyltransferase; Belongs to the GPAT/DAPAT family.
       0.773
AKT38379.1
Uncharacterized protein.
  
     0.746
AKT39341.1
Uncharacterized protein.
  
     0.712
AKT44191.1
Uncharacterized protein.
  
     0.592
AKT42745.1
Uncharacterized protein.
  
     0.566
AKT41573.1
Uncharacterized protein.
  
     0.556
AKT36815.1
Uncharacterized protein.
  
     0.543
AKT41625.1
Uncharacterized protein.
  
     0.540
AKT39200.1
Uncharacterized protein.
  
     0.516
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.