STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT37131.1NDP-sugar oxidoreductase. (319 aa)    
Predicted Functional Partners:
AKT37132.1
Glycosyltransferase.
 
 
 0.979
rfbF
Glucose-1-phosphate cytidylyltransferase.
 
 
 0.894
AKT37130.1
CDP-glucose 4,6-dehydratase.
 
     0.892
ugd
UDP-glucose 6-dehydrogenase.
 
 
 0.726
AKT39068.1
Nucleoside-diphosphate-sugar pyrophosphorylase.
 
 
 0.659
AKT42549.1
Glycosyltransferase.
 
  
 0.613
AKT37128.1
Uncharacterized protein.
       0.559
AKT36021.1
Uncharacterized protein.
 
  
 0.536
rpsN
30S ribosomal protein S14.
   
  0.526
rpsS
30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.
   
  0.526
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.