STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT37143.1Uncharacterized protein. (277 aa)    
Predicted Functional Partners:
AKT38200.1
Lysine 6-monooxygenase.
  
  
 0.636
rnc
Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
   
    0.582
AKT37142.1
Uncharacterized protein.
       0.561
AKT41040.1
Uncharacterized protein.
 
     0.549
AKT37704.1
Uncharacterized protein.
  
     0.503
AKT41060.1
Uncharacterized protein.
 
 
 0.491
AKT43342.1
Uncharacterized protein.
  
   
 0.480
iucA-2
IucA/IucC family protein.
 
  
 0.465
AKT42825.1
Uncharacterized protein.
  
     0.463
AKT43207.1
Uncharacterized protein.
  
     0.461
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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