Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKT36052.1 | AKT37265.1 | CMC5_001640 | CMC5_013960 | Subtilisin like protease; Belongs to the peptidase S8 family. | Peptidase S8; Belongs to the peptidase S8 family. | 0.493 |
AKT37039.1 | AKT37265.1 | CMC5_011650 | CMC5_013960 | Omega-3 fatty acid desaturase. | Peptidase S8; Belongs to the peptidase S8 family. | 0.502 |
AKT37265.1 | AKT36052.1 | CMC5_013960 | CMC5_001640 | Peptidase S8; Belongs to the peptidase S8 family. | Subtilisin like protease; Belongs to the peptidase S8 family. | 0.493 |
AKT37265.1 | AKT37039.1 | CMC5_013960 | CMC5_011650 | Peptidase S8; Belongs to the peptidase S8 family. | Omega-3 fatty acid desaturase. | 0.502 |
AKT37265.1 | AKT39497.1 | CMC5_013960 | CMC5_036440 | Peptidase S8; Belongs to the peptidase S8 family. | Alpha-dextran endo-1,6-alpha-glucosidase; Belongs to the glycosyl hydrolase 13 family. | 0.456 |
AKT37265.1 | AKT41067.1 | CMC5_013960 | CMC5_052260 | Peptidase S8; Belongs to the peptidase S8 family. | Formin. | 0.412 |
AKT37265.1 | trkD | CMC5_013960 | CMC5_013950 | Peptidase S8; Belongs to the peptidase S8 family. | Potassium transporter Kup; Transport of potassium into the cell; Belongs to the HAK/KUP transporter (TC 2.A.72) family. | 0.442 |
AKT39497.1 | AKT37265.1 | CMC5_036440 | CMC5_013960 | Alpha-dextran endo-1,6-alpha-glucosidase; Belongs to the glycosyl hydrolase 13 family. | Peptidase S8; Belongs to the peptidase S8 family. | 0.456 |
AKT41067.1 | AKT37265.1 | CMC5_052260 | CMC5_013960 | Formin. | Peptidase S8; Belongs to the peptidase S8 family. | 0.412 |
trkD | AKT37265.1 | CMC5_013950 | CMC5_013960 | Potassium transporter Kup; Transport of potassium into the cell; Belongs to the HAK/KUP transporter (TC 2.A.72) family. | Peptidase S8; Belongs to the peptidase S8 family. | 0.442 |