Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AKT37283.1Gamma-butyrobetaine dioxygenase. (390 aa)    
Predicted Functional Partners:
aldA-2
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.909
aldA-4
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.909
aldA-8
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.909
AKT37285.1
Uncharacterized protein.
 
    0.656
AKT41800.1
Uncharacterized protein.
  
     0.624
AKT43375.1
Uncharacterized protein.
  
     0.589
AKT36056.1
Uncharacterized protein.
  
     0.570
AKT41199.1
Peptide synthetase.
  
  
 0.548
AKT41802.1
Uncharacterized protein.
  
     0.543
AKT40132.1
Nonribosomal peptide synthase.
  
  
 0.528
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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