Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AKT37284.1Dehydrogenase. (296 aa)    
Predicted Functional Partners:
adhP-9
Alcohol dehydrogenase.
 
    0.703
AKT36153.1
AMP-dependent synthetase.
  
 
 0.617
AKT37285.1
Uncharacterized protein.
   
 
 0.604
AKT38623.1
DNA topoisomerase.
  
 
   0.550
katE
Hydroperoxidase II; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
 0.541
AKT36574.1
Pyridoxamine 5-phosphate oxidase.
  
  
 0.515
AKT44071.1
Uncharacterized protein.
  
     0.514
AKT43540.1
Oxidoreductase.
  
 0.509
AKT40725.1
Uncharacterized protein.
  
 
   0.498
AKT37283.1
Gamma-butyrobetaine dioxygenase.
       0.458
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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