STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tsaAtRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA. (300 aa)    
Predicted Functional Partners:
dehII-4
Haloacid dehalogenase.
       0.543
bolA
BolA family transcriptional regulator; Belongs to the BolA/IbaG family.
  
     0.535
gst-4
Glutathione S-transferase; Belongs to the GST superfamily.
       0.476
moxR
MoxR like ATPase.
  
     0.452
AKT41887.1
Glutathione amide-dependent peroxidase.
 
   
 0.400
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.