STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT37310.1Phytoene dehydrogenase. (489 aa)    
Predicted Functional Partners:
crtB
Phytoene synthase.
 
 0.999
AKT37316.1
Hydroxyneurosporene synthase.
 
 
 0.982
AKT37312.1
Uncharacterized protein.
  
 
 0.980
AKT37454.1
Uncharacterized protein.
  
 
 0.959
AKT37318.1
Geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
 
  
 0.840
merR-2
MerR family transcriptional regulator.
 
  
 0.632
AKT37196.1
FAD-dependent oxidoreductase.
  
     0.626
AKT42118.1
Uncharacterized protein.
  
     0.596
paaG-2
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
     
 0.504
AKT36164.1
3-methyl-2-oxobutanoate dehydrogenase.
     
  0.499
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.