STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT37313.1Beta-carotene hydroxylase. (181 aa)    
Predicted Functional Partners:
AKT37312.1
Uncharacterized protein.
 
  
 0.936
crtB
Phytoene synthase.
 
 
 0.615
croE
3-hydroxy-3-methylglutaryl-ACP synthase.
   
 
 0.614
AKT40762.1
Sensory hisitidine kinase.
   
  
 0.568
AKT37314.1
Uncharacterized protein.
     
 0.559
AKT37454.1
Uncharacterized protein.
  
 
 0.534
dehII-8
Haloacid dehalogenase.
  
     0.510
AKT43732.1
Uncharacterized protein.
  
     0.486
AKT39199.1
Uncharacterized protein.
   
 
 0.454
AKT42791.1
Uncharacterized protein.
   
 
 0.454
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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