Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKT37445.1 | AKT37446.1 | CMC5_015860 | CMC5_015870 | Isopentenyl-diphosphate delta isomerase. | Uncharacterized protein. | 0.773 |
AKT37445.1 | AKT39642.1 | CMC5_015860 | CMC5_037910 | Isopentenyl-diphosphate delta isomerase. | Holliday junction DNA helicase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. | 0.594 |
AKT37445.1 | ffh | CMC5_015860 | CMC5_003110 | Isopentenyl-diphosphate delta isomerase. | Signal recognition particle protein. | 0.561 |
AKT37445.1 | pheT | CMC5_015860 | CMC5_061680 | Isopentenyl-diphosphate delta isomerase. | phenylalanyl-tRNA synthetase subunit beta; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.476 |
AKT37445.1 | rlmE | CMC5_015860 | CMC5_034930 | Isopentenyl-diphosphate delta isomerase. | 50S rRNA methyltransferase; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit. | 0.696 |
AKT37445.1 | tdk | CMC5_015860 | CMC5_007410 | Isopentenyl-diphosphate delta isomerase. | Thymidine kinase. | 0.584 |
AKT37445.1 | ybeY | CMC5_015860 | CMC5_000380 | Isopentenyl-diphosphate delta isomerase. | Uncharacterized protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.518 |
AKT37445.1 | ychF | CMC5_015860 | CMC5_015030 | Isopentenyl-diphosphate delta isomerase. | GTP-binding protein; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. | 0.563 |
AKT37445.1 | ychF-4 | CMC5_015860 | CMC5_048160 | Isopentenyl-diphosphate delta isomerase. | GTP-binding protein; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | 0.563 |
AKT37445.1 | ychF-6 | CMC5_015860 | CMC5_067100 | Isopentenyl-diphosphate delta isomerase. | GTP-binding protein; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | 0.563 |
AKT37446.1 | AKT37445.1 | CMC5_015870 | CMC5_015860 | Uncharacterized protein. | Isopentenyl-diphosphate delta isomerase. | 0.773 |
AKT39642.1 | AKT37445.1 | CMC5_037910 | CMC5_015860 | Holliday junction DNA helicase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. | Isopentenyl-diphosphate delta isomerase. | 0.594 |
AKT39642.1 | pheT | CMC5_037910 | CMC5_061680 | Holliday junction DNA helicase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. | phenylalanyl-tRNA synthetase subunit beta; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.449 |
ffh | AKT37445.1 | CMC5_003110 | CMC5_015860 | Signal recognition particle protein. | Isopentenyl-diphosphate delta isomerase. | 0.561 |
ffh | pheT | CMC5_003110 | CMC5_061680 | Signal recognition particle protein. | phenylalanyl-tRNA synthetase subunit beta; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.504 |
ffh | rlmE | CMC5_003110 | CMC5_034930 | Signal recognition particle protein. | 50S rRNA methyltransferase; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit. | 0.624 |
pheT | AKT37445.1 | CMC5_061680 | CMC5_015860 | phenylalanyl-tRNA synthetase subunit beta; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | Isopentenyl-diphosphate delta isomerase. | 0.476 |
pheT | AKT39642.1 | CMC5_061680 | CMC5_037910 | phenylalanyl-tRNA synthetase subunit beta; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | Holliday junction DNA helicase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. | 0.449 |
pheT | ffh | CMC5_061680 | CMC5_003110 | phenylalanyl-tRNA synthetase subunit beta; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | Signal recognition particle protein. | 0.504 |
rlmE | AKT37445.1 | CMC5_034930 | CMC5_015860 | 50S rRNA methyltransferase; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit. | Isopentenyl-diphosphate delta isomerase. | 0.696 |
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