STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT37452.1Histidine kinase. (789 aa)    
Predicted Functional Partners:
cheY-4
Chemotaxis protein CheY.
 
 0.967
cheY-16
Chemotaxis protein CheY.
 
 
 0.835
cheY-18
Chemotaxis protein CheY.
 
 
 0.825
AKT43143.1
Uncharacterized protein.
 
 
 0.823
AKT43954.1
Transcriptional regulator.
 
   0.815
cheY-19
Chemotaxis protein CheY.
 
 
 0.813
cheY-12
Chemotaxis protein CheY.
 
 
 0.809
cheY-7
Chemotaxis protein CheY.
 
 
 0.808
AKT36476.1
Uncharacterized protein.
 
 
 0.807
AKT36405.1
Transcriptional regulator.
 
 
 
 0.804
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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