STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT37546.1Capsular polysaccharide biosynthesis protein. (734 aa)    
Predicted Functional Partners:
AKT43211.1
Uncharacterized protein.
 
 
 0.988
AKT39872.1
Uncharacterized protein.
 
 
 0.985
AKT37768.1
Outer membrane polysaccharide exporter.
 
 
 0.980
AKT37588.1
UDP-galactose phosphate transferase.
 
  
 0.954
AKT37778.1
Sugar transferase.
 
  
 0.952
AKT37522.1
Polysaccharide biosynthesis protein.
 
  
 0.903
AKT43230.1
Protein-tyrosine phosphatase.
 
  
 0.903
AKT37774.1
Uncharacterized protein.
 
  
 0.787
AKT37547.1
Uncharacterized protein.
       0.727
AKT37769.1
Uncharacterized protein.
 
  
 0.679
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.