STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT37631.1phenylacetate--CoA ligase. (457 aa)    
Predicted Functional Partners:
AKT44083.1
Oxidoreductase FAD-binding domain-containing protein.
 
 
 0.932
AKT39618.1
Amidase; Belongs to the amidase family.
    
  0.903
AKT37630.1
Amidohydrolase.
 
     0.732
AKT37629.1
Coenzyme F390 synthetase.
 
    
0.716
aroB
3-dehydroquinate synthase.
       0.582
aldA-3
Aldehyde dehydrogenase.
 
 
 
 0.572
kbaY
Fructose-bisphosphate aldolase.
       0.558
AKT37626.1
Aspartate kinase; Belongs to the aspartokinase family.
       0.554
AKT43783.1
AMP-binding protein.
 
   
 0.517
livF
Amino acid ABC transporter ATPase.
 
    0.508
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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