STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT37640.1Amino acid ABC transporter permease. (511 aa)    
Predicted Functional Partners:
AKT37639.1
ABC transporter ATP-binding protein.
 0.999
AKT42123.1
Transcriptional antiterminator.
  
  
 0.741
AKT38368.1
Methyltransferase.
 
     0.661
AKT37638.1
ABC transporter sodium permease.
       0.635
AKT36673.1
Uncharacterized protein.
  
    0.630
AKT38635.1
Uncharacterized protein.
  
    0.630
AKT42128.1
Uncharacterized protein.
  
    0.630
AKT38141.1
Uncharacterized protein.
  
  
 0.618
AKT38228.1
Uncharacterized protein.
  
  
 0.618
AKT39024.1
Uncharacterized protein.
  
  
 0.618
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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