STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT37749.1Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (249 aa)    
Predicted Functional Partners:
tetR-2
TetR family transcriptional regulator.
 
     0.629
AKT41319.1
Uncharacterized protein.
  
 
 0.541
AKT38477.1
Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
   0.536
tetR-13
TetR family transcriptional regulator.
  
     0.518
AKT37973.1
Pteridine reductase.
  
     0.488
AKT39319.1
Short-chain dehydrogenase.
  
     0.475
AKT40725.1
Uncharacterized protein.
  
 
   0.453
AKT43419.1
3-beta hydroxysteroid dehydrogenase.
  
 
   0.449
AKT41098.1
3-beta hydroxysteroid dehydrogenase.
  
 
   0.448
tal-2
Uncharacterized protein; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transketolase family.
  
  
 0.419
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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