Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKT37777.1Uncharacterized protein. (222 aa)    
Predicted Functional Partners:
AKT36799.1
Histidine kinase.
 
  
 0.842
AKT37776.1
Anti-sigma factor antagonist; Belongs to the anti-sigma-factor antagonist family.
 
   0.831
AKT36039.1
Uncharacterized protein.
 
  
 0.791
AKT37771.1
Uncharacterized protein.
 
 
 0.732
AKT36900.1
Uncharacterized protein.
 
 
 0.710
AKT43679.1
Uncharacterized protein.
 
 
 0.709
AKT43541.1
Protein phosphatase.
 
 
 0.695
AKT36892.1
Uncharacterized protein.
 
 
 0.694
AKT40762.1
Sensory hisitidine kinase.
  
 
 0.687
thrH-2
Phosphoserine phosphatase.
 
 
 0.679
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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