Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKT37864.1Uncharacterized protein. (750 aa)    
Predicted Functional Partners:
AKT37863.1
DNA-directed RNA polymerase.
       0.773
AKT40535.1
Uncharacterized protein.
 
 
0.744
AKT41890.1
Two-component system sensor protein.
  
 
   0.744
AKT39187.1
Uncharacterized protein.
   
 0.742
AKT37460.1
Diguanylate cyclase.
  
 
 0.704
AKT36799.1
Histidine kinase.
 
 
 0.702
AKT36146.1
Uncharacterized protein.
 
 
 0.683
AKT36904.1
Histidine kinase.
 
 
 0.680
AKT36476.1
Uncharacterized protein.
  
 
 
 0.667
AKT43954.1
Transcriptional regulator.
  
 
   0.656
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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