STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT37894.1Uncharacterized protein. (428 aa)    
Predicted Functional Partners:
cheY-5
Chemotaxis protein CheY.
 0.997
cheY-20
Chemotaxis protein CheY.
 
 
 0.977
AKT43926.1
Histidine kinase.
  
 
 
0.927
AKT37460.1
Diguanylate cyclase.
  
 
 0.924
AKT36799.1
Histidine kinase.
  
 
 0.828
AKT39985.1
Uncharacterized protein.
  
 
0.786
AKT36904.1
Histidine kinase.
 
 
 0.655
AKT38434.1
Signal transduction histidine kinase.
  
 
 0.617
AKT38784.1
Uncharacterized protein.
 
 
 
 0.600
AKT37896.1
Uncharacterized protein.
       0.596
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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