Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKT37926.1Uncharacterized protein. (468 aa)    
Predicted Functional Partners:
AKT37927.1
Alpha/beta hydrolase.
  
    0.766
AKT41684.1
Oligosaccharyl transferase.
 
  
 0.754
AKT37921.1
Uncharacterized protein.
 
     0.612
AKT40970.1
Polysaccharide biosynthesis protein.
 
  
 0.605
AKT37769.1
Uncharacterized protein.
 
  
 0.602
AKT37779.1
O-antigen polymerase.
 
  
 0.570
AKT37922.1
Uncharacterized protein.
       0.548
AKT37923.1
Uncharacterized protein.
       0.548
AKT37924.1
Uncharacterized protein.
       0.548
AKT37925.1
Uncharacterized protein.
       0.548
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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