Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKT37960.1Uncharacterized protein. (416 aa)    
Predicted Functional Partners:
AKT40762.1
Sensory hisitidine kinase.
 
  
 0.962
AKT37959.1
Uncharacterized protein.
 
 
 0.894
AKT40420.1
Uncharacterized protein.
 
 
 0.892
AKT40823.1
Protein kinase.
 
 
 0.892
AKT40421.1
Uncharacterized protein.
 
 
 0.891
AKT40822.1
Uncharacterized protein.
 
 
 0.864
AKT43361.1
Sensor histidine kinase.
 
  
   0.814
AKT40419.1
Sulfate transporter.
  
    0.779
AKT40821.1
Uncharacterized protein.
  
    0.779
AKT43916.1
Two-component hybrid sensor and regulator.
  
 
 0.777
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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