STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT37966.1ompA-family exported protein. (173 aa)    
Predicted Functional Partners:
AKT43508.1
Transport protein, tolQ.
 
   
 0.767
exbD-6
Biopolymer transporter ExbD.
 
 
 
 0.762
exbD-2
Biopolymer transporter ExbD.
 
 
 
 0.759
AKT36818.1
Uncharacterized protein.
  
     0.751
exbD-5
Biopolymer transporter ExbD.
 
 
 
 0.738
AKT41031.1
Uncharacterized protein.
 
 
 
 0.736
AKT43505.1
tolB protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
 
 0.718
exbD
Biopolymer transporter ExbD.
 
 
 
 0.716
AKT39814.1
Membrane protein.
  
 
 
 0.702
AKT37965.1
Uncharacterized protein.
  
    0.698
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.