STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nfrB-3Glycosyl transferase family 2. (479 aa)    
Predicted Functional Partners:
AKT39352.1
Uncharacterized protein.
  
  
 0.632
AKT43916.1
Two-component hybrid sensor and regulator.
  
 
 0.552
AKT40762.1
Sensory hisitidine kinase.
  
  
 0.478
AKT38312.1
Polysaccharide deacetylase.
  
  
 0.473
AKT38854.1
Uncharacterized protein.
   
 
 0.468
AKT40410.1
Polysaccharide deacetylase.
  
  
 0.462
AKT36257.1
Acetylxylan esterase.
  
  
 0.458
AKT42859.1
Polysaccharide deacetylase.
  
  
 0.458
AKT37460.1
Diguanylate cyclase.
  
 
 0.457
ugd
UDP-glucose 6-dehydrogenase.
  
  
 0.440
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.