STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT38002.1Tat pathway signal protein. (334 aa)    
Predicted Functional Partners:
AKT38001.1
4Fe-4S ferredoxin.
 
     0.954
AKT38000.1
Uncharacterized protein.
       0.778
AKT38003.1
Protein kinase.
       0.543
AKT39400.1
Uncharacterized protein; Belongs to the LarC family.
 
     0.482
AKT39399.1
1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate carboxylase.
 
     0.453
AKT41944.1
Uncharacterized protein.
  
     0.438
AKT43116.1
Uncharacterized protein.
 
     0.433
AKT40437.1
Uncharacterized protein.
  
     0.416
AKT41633.1
Uncharacterized protein.
  
     0.406
AKT41626.1
Uncharacterized protein.
  
     0.400
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.