Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKT36799.1 | AKT37460.1 | CMC5_009200 | CMC5_016010 | Histidine kinase. | Diguanylate cyclase. | 0.997 |
AKT36799.1 | AKT37636.1 | CMC5_009200 | CMC5_017780 | Histidine kinase. | Histidine kinase. | 0.954 |
AKT36799.1 | AKT38012.1 | CMC5_009200 | CMC5_021530 | Histidine kinase. | Exported alanine-rich protein. | 0.633 |
AKT36799.1 | AKT38669.1 | CMC5_009200 | CMC5_028170 | Histidine kinase. | Histidine kinase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.997 |
AKT36799.1 | AKT39233.1 | CMC5_009200 | CMC5_033820 | Histidine kinase. | Histidine kinase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.996 |
AKT36799.1 | AKT40407.1 | CMC5_009200 | CMC5_045600 | Histidine kinase. | Uncharacterized protein. | 0.692 |
AKT36799.1 | AKT43672.1 | CMC5_009200 | CMC5_079070 | Histidine kinase. | Histidine kinase. | 0.992 |
AKT36799.1 | cheY-9 | CMC5_009200 | CMC5_038440 | Histidine kinase. | Chemotaxis protein CheY. | 0.993 |
AKT37460.1 | AKT36799.1 | CMC5_016010 | CMC5_009200 | Diguanylate cyclase. | Histidine kinase. | 0.997 |
AKT37460.1 | AKT37636.1 | CMC5_016010 | CMC5_017780 | Diguanylate cyclase. | Histidine kinase. | 0.999 |
AKT37460.1 | AKT38012.1 | CMC5_016010 | CMC5_021530 | Diguanylate cyclase. | Exported alanine-rich protein. | 0.793 |
AKT37460.1 | AKT38669.1 | CMC5_016010 | CMC5_028170 | Diguanylate cyclase. | Histidine kinase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.999 |
AKT37460.1 | AKT39233.1 | CMC5_016010 | CMC5_033820 | Diguanylate cyclase. | Histidine kinase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.999 |
AKT37460.1 | AKT40407.1 | CMC5_016010 | CMC5_045600 | Diguanylate cyclase. | Uncharacterized protein. | 0.950 |
AKT37460.1 | AKT43672.1 | CMC5_016010 | CMC5_079070 | Diguanylate cyclase. | Histidine kinase. | 0.998 |
AKT37460.1 | cheY-9 | CMC5_016010 | CMC5_038440 | Diguanylate cyclase. | Chemotaxis protein CheY. | 0.998 |
AKT37636.1 | AKT36799.1 | CMC5_017780 | CMC5_009200 | Histidine kinase. | Histidine kinase. | 0.954 |
AKT37636.1 | AKT37460.1 | CMC5_017780 | CMC5_016010 | Histidine kinase. | Diguanylate cyclase. | 0.999 |
AKT37636.1 | AKT38012.1 | CMC5_017780 | CMC5_021530 | Histidine kinase. | Exported alanine-rich protein. | 0.750 |
AKT37636.1 | AKT38669.1 | CMC5_017780 | CMC5_028170 | Histidine kinase. | Histidine kinase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.976 |
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