STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKT38058.1Uncharacterized protein. (1806 aa)    
Predicted Functional Partners:
AKT38059.1
Uncharacterized protein.
 
     0.828
AKT36664.1
Uncharacterized protein.
  
 
  0.824
AKT38054.1
Uncharacterized protein.
 
     0.794
AKT38057.1
Uncharacterized protein.
      
0.792
AKT41960.1
Uncharacterized protein.
  
   0.791
AKT37694.1
Heat-shock protein.
  
  0.790
AKT41040.1
Uncharacterized protein.
 
 
   0.787
AKT43343.1
Uncharacterized protein.
  
 
 0.785
AKT41880.1
RNA methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.
 
    0.782
AKT42377.1
Uncharacterized protein.
 
     0.779
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.