Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AKT38061.1ABC transporter permease. (259 aa)    
Predicted Functional Partners:
AKT40355.1
Iron ABC transporter ATP-binding protein.
 0.985
AKT40474.1
Organic solvent ABC transporter ATP-binding protein.
 0.985
AKT41704.1
Organic solvent ABC transporter ATP-binding protein.
 0.985
AKT40684.1
ABC transporter.
 0.981
AKT40227.1
ABC transporter ATP-binding protein.
 0.979
AKT40475.1
Uncharacterized protein.
 
 
 0.889
AKT41703.1
ABC transporter substrate-binding protein.
 
 
 0.860
AKT38346.1
Uncharacterized protein.
  
 
 0.849
AKT43996.1
ABC organic solvent transporter solute-binding substrate-binding protein.
 
 
 0.839
AKT38060.1
Uncharacterized protein.
       0.767
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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