Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKT38185.1Uncharacterized protein. (1130 aa)    
Predicted Functional Partners:
AKT36172.1
Uncharacterized protein.
  
    0.775
AKT43107.1
Uncharacterized protein.
  
     0.770
AKT37828.1
Uncharacterized protein.
  
   0.767
AKT39091.1
Uncharacterized protein.
  
     0.764
AKT39622.1
Uncharacterized protein.
  
     0.761
AKT39088.1
Uncharacterized protein.
  
     0.760
AKT39086.1
Uncharacterized protein.
  
     0.759
AKT39087.1
Uncharacterized protein.
  
     0.758
AKT39089.1
Uncharacterized protein.
  
     0.755
AKT36036.1
Uncharacterized protein.
  
     0.750
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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