Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKT38225.1Uncharacterized protein. (120 aa)    
Predicted Functional Partners:
tugA
Uncharacterized protein.
  
 0.851
cndA
Uncharacterized protein.
   
 0.835
ajuC
Polyketide synthase.
   
 0.720
ajuE
Polyketide synthase.
   
 0.720
AKT36153.1
AMP-dependent synthetase.
  
 0.642
cmdB
Polyketide synthase.
    
 0.609
ajuA
Polyketide synthase.
    
 0.609
AKT37055.1
Sulfate transporter.
    
 0.605
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
    
 0.546
AKT38854.1
Uncharacterized protein.
  
 0.532
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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