Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AKT38227.1RNA polymerase subunit sigma-24; Belongs to the sigma-70 factor family. (425 aa)    
Predicted Functional Partners:
AKT42461.1
Uncharacterized protein.
 
    0.794
AKT42512.1
Dehydrogenase.
 
    0.785
AKT40531.1
Uncharacterized protein.
 
    0.784
AKT42497.1
Dehydrogenase.
 
    0.784
AKT42496.1
Uncharacterized protein.
 
    0.783
AKT35915.1
Uncharacterized protein.
 
    0.557
AKT35917.1
Uncharacterized protein.
 
    0.513
AKT38228.1
Uncharacterized protein.
       0.506
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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