STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT38270.1Uncharacterized protein. (177 aa)    
Predicted Functional Partners:
AKT42916.1
DNA methyltransferase.
  
 
 0.975
AKT42920.1
Uncharacterized protein.
  
  
 0.896
AKT36267.1
Uncharacterized protein.
  
    0.795
AKT42524.1
Uncharacterized protein.
  
  
 0.792
AKT43429.1
Uncharacterized protein.
   
    0.638
AKT43751.1
Epimerase.
   
    0.579
AKT41280.1
Uncharacterized protein.
  
  
 0.541
AKT42501.1
Helicase.
  
  
 0.520
AKT38271.1
Uncharacterized protein.
       0.508
AKT36190.1
Uncharacterized protein.
  
    0.494
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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