STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pilCPilus biosynthesis protein PilC. (405 aa)    
Predicted Functional Partners:
AKT41693.1
Type II secretion system protein E.
 
 0.988
pilM
Pilus assembly protein PilM.
 
 
 
 0.971
AKT40321.1
Uncharacterized protein.
 
 0.949
AKT36717.1
Type II secretion system protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
 0.945
AKT39790.1
Uncharacterized protein.
 
 
 0.930
pilQ
Pilus assembly protein PilQ.
 
 
 
 0.928
pilT
Twitching motility protein PilT.
 
  
 0.895
AKT36225.1
Uncharacterized protein; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
  
 0.889
AKT38382.1
Uncharacterized protein.
 
 
 
 0.883
pilT-2
Twitching motility protein PilT.
  
 0.872
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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