AKT38369.1 protein (Chondromyces crocatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

AKT38369.1

Uncharacterized protein. (191 aa)

Predicted Functional Partners:

AKT41319.1

0.802

accA

0.750

AKT38854.1

0.693

AKT39962.1

0.676

AKT43891.1

0.676

cndA

0.675

ajuL

0.668

accD

0.650

mdcD

0.650

mdcE

0.650

Your Current Organism:

Chondromyces crocatus

NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AKT38369.1	AKT38854.1	CMC5_025150	CMC5_030000	Uncharacterized protein.	Uncharacterized protein.	0.693
AKT38369.1	AKT39962.1	CMC5_025150	CMC5_041150	Uncharacterized protein.	Malonyl CoA-ACP transacylase.	0.676
AKT38369.1	AKT41319.1	CMC5_025150	CMC5_054930	Uncharacterized protein.	Uncharacterized protein.	0.802
AKT38369.1	AKT43891.1	CMC5_025150	CMC5_081280	Uncharacterized protein.	Malonate decarboxylase subunit epsilon.	0.676
AKT38369.1	accA	CMC5_025150	CMC5_009330	Uncharacterized protein.	acetyl-CoA carboxylase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.	0.750
AKT38369.1	accD	CMC5_025150	CMC5_029190	Uncharacterized protein.	acetyl-CoA carboxylase carboxyltransferase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.	0.650
AKT38369.1	ajuL	CMC5_025150	CMC5_054940	Uncharacterized protein.	Uncharacterized protein.	0.668
AKT38369.1	cndA	CMC5_025150	CMC5_053250	Uncharacterized protein.	Uncharacterized protein.	0.675
AKT38369.1	mdcD	CMC5_025150	CMC5_081250	Uncharacterized protein.	Malonate decarboxylase subunit beta.	0.650
AKT38369.1	mdcE	CMC5_025150	CMC5_081260	Uncharacterized protein.	Malonate decarboxylase subunit gamma.	0.650
AKT38854.1	AKT38369.1	CMC5_030000	CMC5_025150	Uncharacterized protein.	Uncharacterized protein.	0.693
AKT38854.1	AKT39962.1	CMC5_030000	CMC5_041150	Uncharacterized protein.	Malonyl CoA-ACP transacylase.	0.897
AKT38854.1	AKT41319.1	CMC5_030000	CMC5_054930	Uncharacterized protein.	Uncharacterized protein.	0.974
AKT38854.1	AKT43891.1	CMC5_030000	CMC5_081280	Uncharacterized protein.	Malonate decarboxylase subunit epsilon.	0.897
AKT38854.1	accA	CMC5_030000	CMC5_009330	Uncharacterized protein.	acetyl-CoA carboxylase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.	0.549
AKT38854.1	accD	CMC5_030000	CMC5_029190	Uncharacterized protein.	acetyl-CoA carboxylase carboxyltransferase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.	0.511
AKT38854.1	ajuL	CMC5_030000	CMC5_054940	Uncharacterized protein.	Uncharacterized protein.	0.990
AKT38854.1	cndA	CMC5_030000	CMC5_053250	Uncharacterized protein.	Uncharacterized protein.	0.998
AKT38854.1	mdcD	CMC5_030000	CMC5_081250	Uncharacterized protein.	Malonate decarboxylase subunit beta.	0.511
AKT38854.1	mdcE	CMC5_030000	CMC5_081260	Uncharacterized protein.	Malonate decarboxylase subunit gamma.	0.511