STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT38370.1Aminomethyltransferase; Belongs to the GcvT family. (314 aa)    
Predicted Functional Partners:
AKT37516.1
Uncharacterized protein; Belongs to the HesB/IscA family.
 
 
 0.693
hemY
Heme biosynthesis protein HemY; Belongs to the HesB/IscA family.
 
 
 0.679
gcvPB
Glycine dehydrogenase subunit 2.
  
  
 0.629
gcvP1
Glycine dehydrogenase subunit 1; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.
  
  
  0.587
lpdA
Dihydrolipoamide dehydrogenase.
  
 
  0.561
AKT38369.1
Uncharacterized protein.
       0.546
grxA-3
Glutaredoxin.
  
 
 0.527
cobA
uroporphyrin-III C-methyltransferase; Belongs to the precorrin methyltransferase family.
     
 0.464
AKT38371.1
Uncharacterized protein.
       0.458
AKT36705.1
Radical SAM protein.
  
   
 0.406
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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