STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT38379.1Uncharacterized protein. (311 aa)    
Predicted Functional Partners:
AKT37014.1
Murein endopeptidase.
  
     0.746
AKT36543.1
Uncharacterized protein.
  
     0.714
AKT39121.1
Uncharacterized protein.
  
     0.696
AKT41573.1
Uncharacterized protein.
  
     0.675
AKT41634.1
Uncharacterized protein.
 
    0.622
AKT41655.1
Uncharacterized protein.
 
     0.610
AKT36815.1
Uncharacterized protein.
  
     0.609
AKT39958.1
Uncharacterized protein.
  
     0.600
AKT42534.1
Uncharacterized protein.
 
    0.587
rpsU
30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.
  
  
 0.573
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.