Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tetR-5TetR family transcriptional regulator. (191 aa)    
Predicted Functional Partners:
AKT38402.1
Alpha/beta hydrolase-like protein.
 
     0.601
AKT40548.1
Uncharacterized protein.
  
     0.536
AKT40557.1
Uncharacterized protein.
  
     0.522
AKT38927.1
Uncharacterized protein.
  
     0.489
AKT38404.1
Uncharacterized protein.
   
   0.481
AKT43828.1
Uncharacterized protein.
  
     0.463
AKT38401.1
Uncharacterized protein.
       0.425
AKT40121.1
Uncharacterized protein.
  
     0.419
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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