STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aldA-3Aldehyde dehydrogenase. (519 aa)    
Predicted Functional Partners:
AKT38430.1
Crotonase.
 
 0.984
aroK
Transcriptional regulator; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
 
  
 0.833
AKT38431.1
benzoyl-CoA oxygenase.
 
  
 0.828
AKT38432.1
benzoyl-CoA oxygenase.
 
 
 0.803
AKT38426.1
4-hydroxybenzoate--CoA ligase.
  
 
 0.726
AKT36824.1
ATPase.
  
 
 0.573
AKT37631.1
phenylacetate--CoA ligase.
 
 
 
 0.572
AKT37629.1
Coenzyme F390 synthetase.
 
 
 
 0.561
AKT44083.1
Oxidoreductase FAD-binding domain-containing protein.
 
 
 0.558
AKT43286.1
4-hydroxybenzoate--CoA ligase.
  
 
 0.533
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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