STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT38458.1Uncharacterized protein. (506 aa)    
Predicted Functional Partners:
AKT38248.1
Uncharacterized protein.
  
  
 0.849
AKT38249.1
Uncharacterized protein.
  
  
 0.815
AKT37377.1
Uncharacterized protein.
  
  
 0.635
AKT37381.1
Uncharacterized protein.
  
  
 0.635
AKT37383.1
Uncharacterized protein.
  
  
 0.635
AKT39877.1
Uncharacterized protein.
  
  
 0.635
AKT40967.1
Uncharacterized protein.
  
  
 0.635
AKT41230.1
Uncharacterized protein.
  
  
 0.635
AKT36385.1
Uncharacterized protein.
  
    0.590
AKT43518.1
Peptidylglycine alpha-amidating monooxygenase.
  
     0.545
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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