Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKT38523.1Uncharacterized protein. (182 aa)    
Predicted Functional Partners:
AKT43385.1
Dynein regulation protein LC7.
 
 
 0.953
AKT40948.1
Uncharacterized protein.
  
 
 0.799
AKT42205.1
Uncharacterized protein.
  
     0.775
AKT41856.1
Uncharacterized protein.
  
 
 0.715
AKT42812.1
Uncharacterized protein.
  
     0.708
ftsY
Cell division protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components.
  
 0.663
AKT36415.1
Uncharacterized protein.
  
 
   0.638
AKT40723.1
Uncharacterized protein.
  
     0.632
pilM
Pilus assembly protein PilM.
  
   
 0.591
AKT40829.1
Uncharacterized protein.
  
     0.590
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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