STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT38630.1Uncharacterized protein. (1081 aa)    
Predicted Functional Partners:
comL
Competence protein ComL.
 
 
 0.902
AKT40439.1
Uncharacterized protein.
 
 
 0.893
AKT42534.1
Uncharacterized protein.
 
   
 0.837
AKT41634.1
Uncharacterized protein.
  
  
 0.780
AKT37393.1
Outer membrane protein.
  
     0.769
AKT39883.1
Uncharacterized protein.
 
  
 0.767
AKT35903.1
Uncharacterized protein.
  
     0.758
gspL
General secretion pathway protein GspL.
  
     0.752
AKT36573.1
Uncharacterized protein.
  
     0.744
AKT41633.1
Uncharacterized protein.
  
 
   0.741
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.